PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan020823
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family ERF
Protein Properties Length: 229aa    MW: 25545.3 Da    PI: 10.1344
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-183a-Artemisia_annua-101160995PU_refplantGDBView CDS
gnl|UG|Aan#S55108054PU_unrefUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.11.4e-203382255
        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               +++GVr ++ +gr++AeIrdp   gk+ r++lg+f+taeeAa+a++aa+++++g
  Aan020823 33 HFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDAAAREFRG 82
               69*******.**********8...557************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.21E-183291No hitNo description
PROSITE profilePS5103223.6833390IPR001471AP2/ERF domain
SMARTSM003804.2E-393396IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.0E-313391IPR001471AP2/ERF domain
SuperFamilySSF541712.48E-223392IPR016177DNA-binding domain
PfamPF008475.6E-143382IPR001471AP2/ERF domain
PRINTSPR003674.6E-113445IPR001471AP2/ERF domain
PRINTSPR003674.6E-115672IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    Send to blast
EPNNYNNKMS PKNTPSKPNP PTNAAVNNNK EAHFRGVRKR PWGRYAAEIR DPGKKSRVWL  60
GTFDTAEEAA RAYDAAAREF RGCKAKTNFP AENNNNNFSN TNSNTFVKLQ NIKKGNHQHH  120
QQSSTSQGST VDSSTTTEPS LDLNLSSSYN NNNNVAPPVK KIPMYRFPPV TGFFAPQMFY  180
YNGILYSGQV PVFRQTFSDD SNSSSVVDVK PVKERVGLDL NLPPPAELF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A6e-223390260ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A9e-223095268ATERF1
3gcc_A9e-223095268ATERF1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
SwissprotO803408e-38ERF78_ARATH; Ethylene-responsive transcription factor 4
TrEMBLA0A103XF067e-50A0A103XF06_CYNCS; AP2/ERF domain-containing protein
STRINGSolyc10g009110.1.11e-41(Solanum lycopersicum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.13e-23erf domain protein 9